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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015946838.1_cds_XP_016488819.1_79409
CDS Infomation

[gene=LOC107808766] [db_xref=GeneID:107808766] [protein=UDP-sugar pyrophosphorylase-like] [protein_id=XP_016488819.1] [location=join(3389..3493,3690..3794,6042..6158,7080..7220,7468..7567,9369..9496,9576..9647,9773..9837,10498..10558,10672..10789,13943..14067,15750..15826,17692..17797,17905..17964,18839..18919,19578..19817,20008..20175)] [gbkey=CDS]
Sequence

ATGACATCGACGGCGGATGAATTCTCGAAGCTTAACATTGGTGGCGATTGGGCTTCCTCT
GCTCCAAATCTCCAGAAAAACCTCTCTCTTCTTTCCCCTGAACAGGTAGAGTTAGCGAAG
GTGTTGTTAGAGAAGGAGCAAAGTCACTTGTTTCAGCATTGGTCAGAGCCTGGAGTTGAT
GATGATGAGAAATGTGCCTTTTTTGATCAGATTGCCAAACTTAATTCAAGTTACCCTGGG
GGTTTGGCAGCATACATTAACACCGCTAGGGAGCTTTTAGCTGATTCAAAGGCTGGAAAA
AACCCGTATGATGGTTTTACACCTTCCGTTCCATCTGGGGAGGTTCTGACATATGGTGAT
GATAATTTTGTTCAATTTGAGGAGGCTGGAGTCAAAGAAGCACGGAAGGCTGCATTTGTT
CTTGTTGCTGGAGGCCTCGGAGAACGTCTTGGGTACAACGGAATAAAGGTGGCCCTTCCT
AGAGAAACAACTGCAGGGACATGCTTCTTACAGCATTACATTGAAACTATTCTTGCTTTA
CAAGAAGCTAGTTGCAGCCTTGCCGAAGGCAACTGCCAAGCGGAGATTCCTTTAGCTATT
ATGACGTCAGATGACACACATTTACGTACCATGGAGCTCTTAGAAAAAAACTCCTTCTTT
GGGATGAAACCCACACAAGTAAAACTGCTTAAGCAGGAAAAAGTTGCCTGTTTAGATGAT
AATGAAGCACACCTTGCTCTGGACCCCCATAATAAATATAGAATTCAGACAAAACCTCAT
GGCCATGGAGACGTCCACTCACTTCTTTACTCAAGTGGCCTTCTTAAAGTTTGGCATGAT
GCAGGCCTAAGATGGGTTCTTTTTTTCCAAGACACCAATGGTCTACTTTTCAAGGCAATT
CCAGCAGCGCTAGGTGTCAGCGCGATAAAACAATACCATGTCAATTCTCTTGCTGTTCCT
CGGAAAGCGAAAGAAGCCATTGGTGGCATTACCAAGCTCACTCATAAAGATGGGCGAACA
ATGGTGATTAATGTGGAATACAACCAGCTCGATCCATTGCTTAGAGCTTCTGGATATCCT
GATGGCGATGTCAATTCTGAAACAGGCTATTCACCTTTTCCTGGAAATATAAATCAGTTA
ATCTTTGAAATTGGCCCTTACATTGAAGAGCTCACAAAAACAGGAGGTGCAATAAAGGAG
TTTGTTAACCCTAAGTATAAAGATGCTACCAAAACTGCTTTCAAGTCCTCAACTCGACTT
GAATGCATGATGCAAGATTATCCTAAAACGCTGCCTCCATCAGCTAGGGTTGGATTCACT
GTGATGGATGCTTGGCTTGCTTATGCACCTGTGAAAAACAACCCAGAAGATGCTGCCAAG
GTGCCGAAAGGAAATCCATATCACAGTGCCACTTCAGGAGAAATGGCCATATATCGCTCT
CATAGCCTCATTCTAAGAAAGGCTGGTGTCAAGATAGATGGTCCGGTTATTCAAGTCTTT
AACGGACAGGAGGTGGAAGTATGGTCTCGAGTTGTGTGGAAGCCTAAATGGGCGCTTACT
TTCTCGGAAGTAAAAAGCAAAGTCAGTGGAAACTGCTCCATTTCACAAAGATCTACAATG
GCAATCAAGGGGCGAGATATTGCCCTTGAGGATCTTTCCCTTGATGGAGCTCTCATTACT
GAGGCTGTCGATGGTGCTGAGGTGAAAGTGGGAGGTTCTGTGCAGAACAAGGGTTGGACA
ATTGAAAATGTCGACTGTAAGGATACTTCAATACCAGAAGAAATAAGAATCAGGGGTTTC
AGATTCAACAAGGTTGAGCAGTTGGAGAAAACATATACCGAGCCCGGAAAATATTTTTTG
AAGCCATAA

Peptide Sequence

PEP ID

XP_016488819.1
PEP Infomation

PREDICTED: UDP-sugar pyrophosphorylase-like [Nicotiana tabacum]
Sequence

MTSTADEFSKLNIGGDWASSAPNLQKNLSLLSPEQVELAKVLLEKEQSHLFQHWSEPGVD
DDEKCAFFDQIAKLNSSYPGGLAAYINTARELLADSKAGKNPYDGFTPSVPSGEVLTYGD
DNFVQFEEAGVKEARKAAFVLVAGGLGERLGYNGIKVALPRETTAGTCFLQHYIETILAL
QEASCSLAEGNCQAEIPLAIMTSDDTHLRTMELLEKNSFFGMKPTQVKLLKQEKVACLDD
NEAHLALDPHNKYRIQTKPHGHGDVHSLLYSSGLLKVWHDAGLRWVLFFQDTNGLLFKAI
PAALGVSAIKQYHVNSLAVPRKAKEAIGGITKLTHKDGRTMVINVEYNQLDPLLRASGYP
DGDVNSETGYSPFPGNINQLIFEIGPYIEELTKTGGAIKEFVNPKYKDATKTAFKSSTRL
ECMMQDYPKTLPPSARVGFTVMDAWLAYAPVKNNPEDAAKVPKGNPYHSATSGEMAIYRS
HSLILRKAGVKIDGPVIQVFNGQEVEVWSRVVWKPKWALTFSEVKSKVSGNCSISQRSTM
AIKGRDIALEDLSLDGALITEAVDGAEVKVGGSVQNKGWTIENVDCKDTSIPEEIRIRGF
RFNKVEQLEKTYTEPGKYFLKP

Transcript Sequence

Gene sequence data has not been registered.